Here is a reference for all PVs (promotional videos) Ayumi Hamasaki has released to date. It is fully updated and includes everything in the span of her career.

This article mainly serves as a listing of every official PV that has been created. Please refer to this thread if you're unsure of whether a PV exists.
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Common inquiries:

The following releases have promotional CMs (commercials):

A Song for XX
Powder snow
AUDIENCE
I am...

These are not full PVs; they are clips that advertise the singles/albums. A short film also exists for "ever free" - it was played as a clip during Concert Tour 2000.
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Listed in chronological order (by year):

1998 1999 2000

2001 2002 2003

2004 2005 2006

poker face

http://i7.photobucket.com/albums/y294/kittywaves/pf.gif

Director: Wataru Takeishi
Released: April 1998

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YOU

http://i7.photobucket.com/albums/y29...ywaves/you.gif

Director: Wataru Takeishi
Released: June 1998

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Trust

http://i7.photobucket.com/albums/y294/kittywaves/tr.gif

Director: Wataru Takeishi
Released: August 1998
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For My Dear...

http://i7.photobucket.com/albums/y29...ywaves/fmd.gif

Director: Hiromitsu Odagami
Released: October 1998

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Depend on you

http://i7.photobucket.com/albums/y29...ywaves/doy.gif

Director: Masashi Muto
Released: December 1998

WHATEVER

http://i7.photobucket.com/albums/y29...ywaves/wha.gif

Director: Wataru Takeishi
Released: February 1999

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LOVE ~Destiny~

http://i7.photobucket.com/albums/y294/kittywaves/ld.gif

Director: Wataru Takeishi
Released: April 1999

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TO BE

http://i7.photobucket.com/albums/y294/kittywaves/tb.gif

Director: Wataru Takeishi
Released: May 1999

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Boys & Girls

http://i7.photobucket.com/albums/y294/kittywaves/bg.gif

Director: Wataru Takeishi
Released: July 1999
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appears

http://i7.photobucket.com/albums/y294/kittywaves/ap.gif

Director: Wataru Takeishi
Released: November 1999

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kanariya

http://i7.photobucket.com/albums/y29...ywaves/kan.gif

Director: Wataru Takeishi
Released: December 1999

Fly high

http://i7.photobucket.com/albums/y294/kittywaves/fh.gif

Director: Wataru Takeishi
Released: February 2000

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vogue/Far away/SEASONS

http://img29.imageshack.us/img29/2551/vog7ed.gifhttp://img59.imageshack.us/img59/1976/fa5xz.gifhttp://i7.photobucket.com/albums/y29...ywaves/sea.gif

Director: Wataru Takeishi
Released: April/May/June 2000

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SURREAL

http://i7.photobucket.com/albums/y29...ywaves/sur.gif

Director: Wataru Takeishi
Released: September 2000

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M

http://i7.photobucket.com/albums/y294/kittywaves/m.gif

Director: Wataru Takeishi
Released: December 2000

Evolution

http://i7.photobucket.com/albums/y294/kittywaves/ev.gif

Director: Wataru Takeishi
Released: January 2001

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NEVER EVER (Promotional clip)

http://i7.photobucket.com/albums/y294/kittywaves/ne.gif

Director: Wataru Takeishi
Released: Spring 2001

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Endless sorrow

http://i7.photobucket.com/albums/y294/kittywaves/es.gif

Director: Wataru Takeishi
Released: May 2001

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UNITE! (Promotional clip)

http://i7.photobucket.com/albums/y29...ywaves/uni.gif

Director: Takahide Ishii
Released: Summer 2001
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Dearest

http://i7.photobucket.com/albums/y294/kittywaves/de.gif

Director: Wataru Takeishi
Released: September 2001
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Dearest (Acoustic Orchestra Version)

http://i7.photobucket.com/albums/y29...ywaves/dea.gif

Director: Wataru Takeishi
Released: September 2001

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M (Above & Beyond remix)

http://i7.photobucket.com/albums/y294/kittywaves/mr.gif

Director: Masato Okazaki
Released: Fall 2001

Daybreak

http://i7.photobucket.com/albums/y294/kittywaves/db.gif

Director: Wataru Takeishi
Released: March 2002

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Free & Easy

http://i7.photobucket.com/albums/y294/kittywaves/fe.gif

Director: Wataru Takeishi
Released: April 2002

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Connected

http://i7.photobucket.com/albums/y29...waves/conn.gif

Director: STUDIO 4°C Connected PROJECT
Released: Summer 2002

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Voyage

http://i7.photobucket.com/albums/y29...ywaves/voy.gif

Director: Isao Yukisada
Released: September 2002

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Real me

http://i7.photobucket.com/albums/y294/kittywaves/rm.gif

Director: Ukon Kamimura
Released: September 2002

RAINBOW

http://i7.photobucket.com/albums/y294/kittywaves/ra.gif

Director: Wataru Takeishi
Released: March 2003

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ourselves

http://i7.photobucket.com/albums/y29...ywaves/our.gif

Director: Kouki Tange
Released: July 2003

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Greatful days

http://i7.photobucket.com/albums/y294/kittywaves/gd.gif

Director: Hideo (Hideaki) Sunaga
Released: July 2003
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Hanabi ~episode II~

http://i7.photobucket.com/albums/y29...ywaves/han.gif

Director: Shuichi Tan
Released: July 2003
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forgiveness

http://i7.photobucket.com/albums/y29...ywaves/for.gif

Director: Yoshiya Okoyama
Released: August 2003

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No way to say

http://i7.photobucket.com/albums/y29...waves/nwts.gif

Director: Ukon Kamimura
Released: November 2003
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Because of you

http://i7.photobucket.com/albums/y29...ywaves/boy.gif

Director: Kouki Tange
Released: December 2003

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ANGEL'S SONG

http://i7.photobucket.com/albums/y294/kittywaves/as.gif

Director: Hideo (Hideaki) Sunaga
Released: December 2003

Moments

http://i7.photobucket.com/albums/y29...ywaves/mom.gif

Director: Tetsuo Inoue
Released: March 2004

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INSPIRE

http://i7.photobucket.com/albums/y294/kittywaves/in.gif

Director: Tetsuo Inoue
Released: July 2004

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GAME

http://i7.photobucket.com/albums/y294/kittywaves/ga.gif

Director: Hideo (Hideaki) Sunaga
Released: July 2004

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CAROLS

http://i7.photobucket.com/albums/y294/kittywaves/ca.gif

Director: Masashi Muso
Released: September 2004
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About you

http://i7.photobucket.com/albums/y294/kittywaves/ay.gif

Director: Hideo (Hideaki) Sunaga
Released: December 2004
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walking proud

http://i7.photobucket.com/albums/y294/kittywaves/wp.gif

Director: Ken Sueda
Released: December 2004

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Humming 7/4

http://i7.photobucket.com/albums/y294/kittywaves/hu.gif

Director: Wataru Takeishi
Released: December 2004

STEP you

http://i7.photobucket.com/albums/y294/kittywaves/sy.gif

Director: Tetsuo Inoue
Released: April 2005

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is this LOVE?

http://i7.photobucket.com/albums/y294/kittywaves/is.gif

Director: Masashi Muto
Released: April 2005

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my name's WOMEN

http://i7.photobucket.com/albums/y294/kittywaves/mn.gif

Director: Wataru Takeishi
Released: April 2005

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fairyland

http://i7.photobucket.com/albums/y294/kittywaves/fl.gif

Director: Wataru Takeishi
Released: July 2005
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alterna

http://i7.photobucket.com/albums/y294/kittywaves/al.gif

Director: Kouki Tange
Released: July 2005

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HEAVEN

http://i7.photobucket.com/albums/y294/kittywaves/he.gif

Director: Wataru Takeishi
Released: September 2005
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Bold & Delicious

http://i7.photobucket.com/albums/y294/kittywaves/bd.gif

Director: Luis Hernandez
Released: November 2005
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Pride

http://i7.photobucket.com/albums/y294/kittywaves/pr.gif

Director: Luis Hernandez
Released: November 2005

rainy day

http://i7.photobucket.com/albums/y294/kittywaves/rd.gif

Director: Tetsuo Inoue
Released: January 2006

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Ladies Night

http://i7.photobucket.com/albums/y294/kittywaves/ln.gif

Director: Masashi Muto
Released: January 2006

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Startin'

http://i7.photobucket.com/albums/y29...es/startin.gif

Released: March 2006
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Born To Be...

http://i7.photobucket.com/albums/y29...s/borntobe.gif

Released: March 2006